Marker Name: Vf_Mt1g071110_001 |
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| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_3 Location cM: 66.42 | |
| Parents SNP Call | NV643-4 call: C:C NV648-1 call: G:G | |
| Target Sequence | GTCATTGGACTGAGGATATGAGAGATGAGGCTCTTGAACCGGCTGAACTCACTMATAGGA ATATGCTTGTTGTTGATGTTGGTGGTGGGACTGGTTTTAC[S]ACGTTGGGTATTGTGAA GCATGTGGAYGCTAAGAAYGTTACCATTCTTGATCAGTCTCCGCATCAGCTTGCTAAAGC TAAGGAAAAGGAACCGCTTAAGG |
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| SNP Position | 100 | |
| NV643-3 allele (sequence) | GTCATTGGACTGAGGATATGAGAGATGAGGCTCTTGAACCGGCTGAACTCACTAATAGGA ATATGCTTGTTGTTGATGTTGGTGGTGGGACTGGTTTTACCACGTTGGGTATTGTGAAGC ATGTGGATGCTAAGAACGTTACCATTCTTGATCAGTCTCCGCATCAGCTTGCTAAAGCTA AGGAAAAGGAACCGCTTAAGG |
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| NV648-1 allele (sequence) | GTCATTGGACTGAGGATATGAGAGATGAGGCTCTTGAACCGGCTGAACTCACTAATAGGA ATATGCTTGTTGTTGATGTTGGTGGTGGGACTGGTTTTACGACGTTGGGTATTGTGAAGC ATGTGGATGCTAAGAATGTTACCATTCTTGATCAGTCTCCGCATCAGCTTGCTAAAGCTA AGGAAAAGGAACCGCTTAAGG |
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| EH/PIC | 0.416 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
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| Sequence Similarity | NCBI Accession Number: XM_003590510.3 NCBI Gene Symbol: LOC11429739 | |
| Gene Description | 2-methyl-6-phytyl-1 4-hydroquinone methyltransferase | |
| Similar Organisms | Medicago truncatula | |
| Alignment Scores | Identity Percentage: 91.045 Mismatches: 18 Open Gaps: 0 Evalue: 2.52E-069 | |