Marker Name: Vf_Mt2g005930_001 |
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| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_1 Location cM: 0 | |
| Parents SNP Call | NV643-4 call: C:C NV648-1 call: A:A | |
| Target Sequence | CAGGCTCGGTCTAAGACAGAGACTGCACGGCAAAAGGTTGCTCAAGAGGTACAGAAAGAA CTTCGAAATATCCAACAAGAGGCCATGCAAAGAAGAAAGG[M]AGAGAGGAAAAAAATGT TGGARGAGGCTGAGGCAAAGCTCGGTGCTGAGGCCATTCGAAAGAGAGAAGCAAAAGAAC GTGCTCGCCAAATGAAAAA |
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| SNP Position | 100 | |
| NV643-3 allele (sequence) | CAGGCTCGGTCTAAGACAGAGACTGCACGGCAAAAGGTTGCTCAAGAGGTACAGAAAGAA CTTCGAAATATCCAACAAGAGGCCATGCAAAGAAGAAAGGCAGAGAGGAAAAAAATGTTG GAAGAGGCTGAGGCAAAGCTCGGTGCTGAGGCCATTCGAAAGAGAGAAGCAAAAGAACGT GCTCGCCAAATGAAAAA |
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| NV648-1 allele (sequence) | CAGGCTCGGTCTAAGACAGAGACTGCACGGCAAAAGGTTGCTCAAGAGGTACAGAAAGAA CTTCGAAATATCCAACAAGAGGCCATGCAAAGAAGAAAGGAAGAGAGGAAAAAAATGTTG GAGGAGGCTGAGGCAAAGCTCGGTGCTGAGGCCATTCGAAAGAGAGAAGCAAAAGAACGT GCTCGCCAAATGAAAAA |
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| EH/PIC | 0.043 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
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| Sequence Similarity | NCBI Accession Number: XM_003592889.3 NCBI Gene Symbol: LOC11421155 | |
| Gene Description | uncharacterized protein At5g49945 | |
| Similar Organisms | Medicago truncatula | |
| Alignment Scores | Identity Percentage: 94.416 Mismatches: 11 Open Gaps: 0 Evalue: 8.95E-079 | |