Marker Name: Vf_Mt2g042700_001 |
||
| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_1 Location cM: 62.42 | |
| Parents SNP Call | NV643-4 call: C:C NV648-1 call: G:G | |
| Target Sequence | GGATGGAATTCCTCGATTTTGACTAAAACTTCCTACCGCCTTCAAGCTGATGGTCCTATC TGCAAATTTTAATGCAGCTGTGACTCAAGTTTGATAACAA[S]GGGTGGAAGAAAAAGTA ATATGGTTGATGTGCATTTATCTTCTTTAGAAACTAGCGCGACATGAGACMGAATACTTC ACAGCTA |
|
| SNP Position | 100 | |
| NV643-3 allele (sequence) | GGATGGAATTCCTCGATTTTGACTAAAACTTCCTACCGCCTTCAAGCTGATGGTCCTATC TGCAAATTTTAATGCAGCTGTGACTCAAGTTTGATAACAAGGGGTGGAAGAAAAAGTAAT ATGGTTGATGTGCATTTATCTTCTTTAGAAACTAGCGCGACATGAGACAGAATACTTCAC AGCTA |
|
| NV648-1 allele (sequence) | GGATGGAATTCCTCGATTTTGACTAAAACTTCCTACCGCCTTCAAGCTGATGGTCCTATC TGCAAATTTTAATGCAGCTGTGACTCAAGTTTGATAACAACGGGTGGAAGAAAAAGTAAT ATGGTTGATGTGCATTTATCTTCTTTAGAAACTAGCGCGACATGAGACCGAATACTTCAC AGCTA |
|
| EH/PIC | 0.127 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
||
| Sequence Similarity | NCBI Accession Number: XM_003595291.3 NCBI Gene Symbol: LOC11444969 | |
| Gene Description | sm-like protein LSM1B | |
| Similar Organisms | Medicago truncatula | |
| Alignment Scores | Identity Percentage: 84.694 Mismatches: 19 Open Gaps: 7 Evalue: 3.38E-043 | |