Marker Name: Vf_Mt3g010290_001 |
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| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_2 Location cM: 230.62 | |
| Parents SNP Call | NV643-4 call: G:G NV648-1 call: A:A | |
| Target Sequence | GCTTNGGAGGCCGCACCTTCTTTTCNACAGGTGGTATTTTGAGACAATAGGTAAAAGGAC TTATGTATTTCTAATGGAAGATGGATATGTTTACTTCACA[R]TTGTTGATGAAGGTCTT GGTAACTTGRTAGTTCTTCGGTTTTTGGNAACACGTTAGAGATGAATTCAGAAAGGTAGC TAGAAAAGGTTCAAGGGGTTTTT |
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| SNP Position | 100 | |
| NV643-3 allele (sequence) | GCTTTGGAGGCCGCACCTTCTTTTCTACAGGTGGTATTTTGAGACAATAGGTAAAAGGAC TTATGTATTTCTAATGGAAGATGGATATGTTTACTTCACAGTTGTTGATGAAGGTCTTGG TAACTTGGTAGTTCTTCGGTTTTTGGTAACACGTTAGAGATGAATTCAGAAAGGTAGCTA GAAAAGGTTCAAGGGGTTTTT |
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| NV648-1 allele (sequence) | GCTT-GGAGGCCGCACCTTCTTTTC-ACAGGTGGTATTTTGAGACAATAGGTAAAAGGAC TTATGTATTTCTAATGGAAGATGGATATGTTTACTTCACAATTGTTGATGAAGGTCTTGG TAACTTGATAGTTCTTCGGTTTTTGG-AACACGTTAGAGATGAATTCAGAAAGGTAGCTA GAAAAGGTTCAAGGGGTTTTT |
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| EH/PIC | 0.423 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
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| Sequence Similarity | NCBI Accession Number: XM_003598274.3 NCBI Gene Symbol: LOC11406993 | |
| Gene Description | phytolongin Phyl1.1 | |
| Similar Organisms | Medicago truncatula | |
| Alignment Scores | Identity Percentage: 90.452 Mismatches: 16 Open Gaps: 3 Evalue: 1.96E-065 | |