Marker Name: Vf_Mt3g060850_001 |
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Map Name | SNP-based consensus genetic map: 2016 | |
Marker Type | SNP | |
Linkage Group & Location cM | Linkage Group: group-Vf_Chr_2 Location cM: 190.48 | |
Parents SNP Call | NV643-4 call: G:G NV648-1 call: A:A | |
Target Sequence | AGATGCTTTGGGAGGTGACCTATTTTTGGTTAATAGGAGTTGAGGTCAGATATTTCTCTA TATAGTAGTTGGCTTGTACATTTTGTCAACTAAAAGATCT[R]TCAGCTGAAACCAAATT GACCCAAGATTATTGCCNGAGTTGAGGCATCATCTAACATTTTCTTATAGTTCGATGTTT GTTGCCACTTGCCA |
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SNP Position | 100 | |
NV643-3 allele (sequence) | AGATGCTTTGGGAGGTGACCTATTTTTGGTTAATAGGAGTTGAGGTCAGATATTTCTCTA TATAGTAGTTGGCTTGTACATTTTGTCAACTAAAAGATCTGTCAGCTGAAACCAAATTGA CCCAAGATTATTGCC-GAGTTGAGGCATCATCTAACATTTTCTTATAGTTCGATGTTTGT TGCCACTTGCCA |
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NV648-1 allele (sequence) | AGATGCTTTGGGAGGTGACCTATTTTTGGTTAATAGGAGTTGAGGTCAGATATTTCTCTA TATAGTAGTTGGCTTGTACATTTTGTCAACTAAAAGATCTATCAGCTGAAACCAAATTGA CCCAAGATTATTGCCAGAGTTGAGGCATCATCTAACATTTTCTTATAGTTCGATGTTTGT TGCCACTTGCCA |
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EH/PIC | 0.487 | |
Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
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Sequence Similarity | NCBI Accession Number: XM_003600361.3 NCBI Gene Symbol: LOC11445345 | |
Gene Description | protein transport protein SFT2 | |
Similar Organisms | Medicago truncatula | |
Alignment Scores | Identity Percentage: 87.958 Mismatches: 21 Open Gaps: 2 Evalue: 7.17E-055 |