Marker Name: Vf_Mt3g076630_001 |
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| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_3 Location cM: 165.6 | |
| Parents SNP Call | NV643-4 call: G:G NV648-1 call: G:G | |
| Target Sequence | CATTACACATCCGGAGGCCAGTTTAAAATCCCAGTTGTCATTCGTGGGCCCGGYGGAGTY GGACGACAACTTGGAGCAGAACACTCGCA[R]CGTCTGGAGTCATACTTTCAATCAATCC CTGGTATTCAGATGGTGGCTTGCTCAACACCTTACAAYGCKAAGGGCTTGATGAAAGCCG CAATTCG |
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| SNP Position | 89 | |
| NV643-3 allele (sequence) | CATTACACATCCGGAGGCCAGTTTAAAATCCCAGTTGTCATTCGTGGGCCCGGCGGAGTT GGACGACAACTTGGAGCAGAACACTCGCAACGTCTGGAGTCATACTTTCAATCAATCCCT GGTATTCAGATGGTGGCTTGCTCAACACCTTACAACGCGAAGGGCTTGATGAAAGCCGCA ATTCG |
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| NV648-1 allele (sequence) | CATTACACATCCGGAGGCCAGTTTAAAATCCCAGTTGTCATTCGTGGGCCCGGCGGAGTT GGACGACAACTTGGAGCAGAACACTCGCAGCGTCTGGAGTCATACTTTCAATCAATCCCT GGTATTCAGATGGTGGCTTGCTCAACACCTTACAATGCTAAGGGCTTGATGAAAGCCGCA ATTCG |
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| EH/PIC | 0.122 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
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| Sequence Similarity | NCBI Accession Number: XM_003601109.3 NCBI Gene Symbol: LOC11411402 | |
| Gene Description | pyruvate dehydrogenase E1 component subunit beta-3 | |
| Similar Organisms | Medicago truncatula | |
| Alignment Scores | Identity Percentage: 92.432 Mismatches: 14 Open Gaps: 0 Evalue: 4.22E-067 | |