Marker Name: Vf_Mt3g087760_001 |
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| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_2 Location cM: 118.11 | |
| Parents SNP Call | NV643-4 call: T:T NV648-1 call: T:T | |
| Target Sequence | AGAGAGGTTTTTGTTGTGAATTGTATAATTGGTCACCATTTGAGTCACAAGGAATTTGGT GTTTGTTTAAGCTTGATGAAAAGCTTACTCTCTCGCGATTCTAC[Y]GATCCTTATTTGA TTTCGCAACTTGGGTATATTCAATTACAAACCGGTGACTTGGAAGGTGCGAAAGCTTCGT TTTTGAAAGCCGAAGTTGATGGGAAGA |
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| SNP Position | 104 | |
| NV643-3 allele (sequence) | AGAGAGGTTTTTGTTGTGAATTGTATAATTGGTCACCATTTGAGTCACAAGGAATTTGGT GTTTGTTTAAGCTTGATGAAAAGCTTACTCTCTCGCGATTCTACCGATCCTTATTTGATT TCGCAACTTGGGTATATTCAATTACAAACCGGTGACTTGGAAGGTGCGAAAGCTTCGTTT TTGAAAGCCGAAGTTGATGGGAAGA |
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| NV648-1 allele (sequence) | AGAGAGGTTTTTGTTGTGAATTGTATAATTGGTCACCATTTGAGTCACAAGGAATTTGGT GTTTGTTTAAGCTTGATGAAAAGCTTACTCTCTCGCGATTCTACTGATCCTTATTTGATT TCGCAACTTGGGTATATTCAATTACAAACCGGTGACTTGGAAGGTGCGAAAGCTTCGTTT TTGAAAGCCGAAGTTGATGGGAAGA |
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| EH/PIC | 0.32 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
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| Sequence Similarity | NCBI Accession Number: XM_004502388.3 NCBI Gene Symbol: LOC101499901 | |
| Gene Description | trafficking protein particle complex subunit 12 | |
| Similar Organisms | Cicer arietinum | |
| Alignment Scores | Identity Percentage: 89.756 Mismatches: 21 Open Gaps: 0 Evalue: 1.52E-066 | |