Marker Name: Vf_Mt3g091460_001 |
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| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_2 Location cM: 116.69 | |
| Parents SNP Call | NV643-4 call: T:T NV648-1 call: T:T | |
| Target Sequence | GGTGGGGTTGTGGAAGATGGGGTTGTTTTGGGGTGTTTGATGAAGGGTTATTTTCTCAAG GGGATGGAGAAGGAGGCTTTAGAGTGTTA[Y]CAAGAGGTGTTTGCTGAGGGGAAGAGGA TGAGTGACATTGCTTATAACTCAGTGCTTGATGCTCTTACAAAGAACGGAAAGTTTGATG A |
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| SNP Position | 89 | |
| NV643-3 allele (sequence) | GGTGGGGTTGTGGAAGATGGGGTTGTTTTGGGGTGTTTGATGAAGGGTTATTTTCTCAAG GGGATGGAGAAGGAGGCTTTAGAGTGTTACCAAGAGGTGTTTGCTGAGGGGAAGAGGATG AGTGACATTGCTTATAACTCAGTGCTTGATGCTCTTACAAAGAACGGAAAGTTTGATGA |
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| NV648-1 allele (sequence) | GGTGGGGTTGTGGAAGATGGGGTTGTTTTGGGGTGTTTGATGAAGGGTTATTTTCTCAAG GGGATGGAGAAGGAGGCTTTAGAGTGTTATCAAGAGGTGTTTGCTGAGGGGAAGAGGATG AGTGACATTGCTTATAACTCAGTGCTTGATGCTCTTACAAAGAACGGAAAGTTTGATGA |
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| EH/PIC | 0.463 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
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| Sequence Similarity | NCBI Accession Number: XM_003602199.3 NCBI Gene Symbol: LOC11414344 | |
| Gene Description | pentatricopeptide repeat-containing protein At3g49240 | |
| Similar Organisms | Medicago truncatula | |
| Alignment Scores | Identity Percentage: 90.503 Mismatches: 17 Open Gaps: 0 Evalue: 9.21E-059 | |