Marker Name: Vf_Mt3g091780_001 |
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| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_2 Location cM: 116.29 | |
| Parents SNP Call | NV643-4 call: G:G NV648-1 call: C:C | |
| Target Sequence | GTTGAAAGATGTTGTTGATACCTTAAAGGATGATGCACCAYATCTAAATTCAATACTTAT GCATATGGGAAGTATGTATGCGACATTGAACAAGTTT[S]AAGAGTCACTAGACAYGTAT CARAGGGCTGTCTACATTGTGGAAAGGATTTA |
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| SNP Position | 97 | |
| NV643-3 allele (sequence) | GTTGAAAGATGTTGTTGATACCTTAAAGGATGATGCACCACATCTAAATTCAATACTTAT GCATATGGGAAGTATGTATGCGACATTGAACAAGTTTGAAGAGTCACTAGACACGTATCA GAGGGCTGTCTACATTGTGGAAAGGATTTA |
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| NV648-1 allele (sequence) | GTTGAAAGATGTTGTTGATACCTTAAAGGATGATGCACCATATCTAAATTCAATACTTAT GCATATGGGAAGTATGTATGCGACATTGAACAAGTTTCAAGAGTCACTAGACATGTATCA AAGGGCTGTCTACATTGTGGAAAGGATTTA |
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| EH/PIC | 0.24 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
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| Sequence Similarity | NCBI Accession Number: XM_003602231.3 NCBI Gene Symbol: LOC11421662 | |
| Gene Description | nephrocystin-3 | |
| Similar Organisms | Medicago truncatula | |
| Alignment Scores | Identity Percentage: 92.667 Mismatches: 11 Open Gaps: 0 Evalue: 1.2E-052 | |