Marker Name: Vf_Mt3g094760_001 |
||
| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_2 Location cM: 110.86 | |
| Parents SNP Call | NV643-4 call: T:T NV648-1 call: A:A | |
| Target Sequence | TTTGCTCTTCCAGCGGGCATCAACATTGTCATCACAAACTATGCCAGTTACTTTCATCCT TTTGATGCTATGTATTGGCTGCGGTTACTGTGGAAAACTG[W]GTATAGACACATTGGGA GGGAGTGGTAATGTTTGGCTCTTATATTGGGAGATTCTTTGTTTGCTGCATTTCGTATCT ATATGCTGGACATCTGCTTTGTA |
|
| SNP Position | 100 | |
| NV643-3 allele (sequence) | TTTGCTCTTCCAGCGGGCATCAACATTGTCATCACAAACTATGCCAGTTACTTTCATCCT TTTGATGCTATGTATTGGCTGCGGTTACTGTGGAAAACTGTGTATAGACACATTGGGAGG GAGTGGTAATGTTTGGCTCTTATATTGGGAGATTCTTTGTTTGCTGCATTTCGTATCTAT ATGCTGGACATCTGCTTTGTA |
|
| NV648-1 allele (sequence) | TTTGCTCTTCCAGCGGGCATCAACATTGTCATCACAAACTATGCCAGTTACTTTCATCCT TTTGATGCTATGTATTGGCTGCGGTTACTGTGGAAAACTGAGTATAGACACATTGGGAGG GAGTGGTAATGTTTGGCTCTTATATTGGGAGATTCTTTGTTTGCTGCATTTCGTATCTAT ATGCTGGACATCTGCTTTGTA |
|
| EH/PIC | 0.043 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
||
| Sequence Similarity | NCBI Accession Number: XM_003602425.3 NCBI Gene Symbol: LOC11428224 | |
| Gene Description | protein CPR-5 | |
| Similar Organisms | Medicago truncatula | |
| Alignment Scores | Identity Percentage: 90.05 Mismatches: 20 Open Gaps: 0 Evalue: 5.46E-066 | |