Marker Name: Vf_Mt3g108690_001 |
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Map Name | SNP-based consensus genetic map: 2016 | |
Marker Type | SNP | |
Linkage Group & Location cM | Linkage Group: group-Vf_Chr_2 Location cM: 73.68 | |
Parents SNP Call | NV643-4 call: A:A NV648-1 call: A:A | |
Target Sequence | ATGTTGAACTTGTGCAGTCCTCTGGACTTCGAAATCGGAAACAAGCTCAAACTAGATCCA CTGGTACAGGGACAACCTCACCAAATTTTGCTGATCAACA[W]TTAGTAGGTTCAGGTGG ATTCGRTCAAACCCAGGGGTCTGAGAATAATCAACTTGTTGTTGTTGAACATCAACCTCA AAGTTCAAACCCACAAGATG |
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SNP Position | 100 | |
NV643-3 allele (sequence) | ATGTTGAACTTGTGCAGTCCTCTGGACTTCGAAATCGGAAACAAGCTCAAACTAGATCCA CTGGTACAGGGACAACCTCACCAAATTTTGCTGATCAACATTTAGTAGGTTCAGGTGGAT TCGATCAAACCCAGGGGTCTGAGAATAATCAACTTGTTGTTGTTGAACATCAACCTCAAA GTTCAAACCCACAAGATG |
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NV648-1 allele (sequence) | ATGTTGAACTTGTGCAGTCCTCTGGACTTCGAAATCGGAAACAAGCTCAAACTAGATCCA CTGGTACAGGGACAACCTCACCAAATTTTGCTGATCAACAATTAGTAGGTTCAGGTGGAT TCGATCAAACCCAGGGGTCTGAGAATAATCAACTTGTTGTTGTTGAACATCAACCTCAAA GTTCAAACCCACAAGATG |
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EH/PIC | 0.13 | |
Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
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Sequence Similarity | NCBI Accession Number: XM_003603474.3 NCBI Gene Symbol: LOC11433034 | |
Gene Description | uncharacterized protein At2g24330 | |
Similar Organisms | Medicago truncatula | |
Alignment Scores | Identity Percentage: 89.552 Mismatches: 18 Open Gaps: 1 Evalue: 3.29E-063 |