Marker Name: Vf_Mt3g116080_001 |
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| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_2 Location cM: 47.72 | |
| Parents SNP Call | NV643-4 call: T:T NV648-1 call: C:C | |
| Target Sequence | ATAAACTCATTGAACTCTTCGAGTCATGGATGTCGAGACACRGTAAGATTTACGAKAGCA TCGAGGAAAAACTACTCCGGTTCGAAGTGTTTAAGGATAA[Y]CTAAAGCACATTGATGA TAGAAACAAGGCTGTTAGCAACTATTGGCTTGGTTTGAATGAGTTTGCTGATTTGAGTCA CCAAGAATTCAAG |
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| SNP Position | 100 | |
| NV643-3 allele (sequence) | ATAAACTCATTGAACTCTTCGAGTCATGGATGTCGAGACACGGTAAGATTTACGAGAGCA TCGAGGAAAAACTACTCCGGTTCGAAGTGTTTAAGGATAATCTAAAGCACATTGATGATA GAAACAAGGCTGTTAGCAACTATTGGCTTGGTTTGAATGAGTTTGCTGATTTGAGTCACC AAGAATTCAAG |
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| NV648-1 allele (sequence) | ATAAACTCATTGAACTCTTCGAGTCATGGATGTCGAGACACGGTAAGATTTACGAGAGCA TCGAGGAAAAACTACTCCGGTTCGAAGTGTTTAAGGATAACCTAAAGCACATTGATGATA GAAACAAGGCTGTTAGCAACTATTGGCTTGGTTTGAATGAGTTTGCTGATTTGAGTCACC AAGAATTCAAG |
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| EH/PIC | 0.298 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
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| Sequence Similarity | NCBI Accession Number: NM_001365267.1 NCBI Gene Symbol: LOC101500447 | |
| Gene Description | cysteine protease XCP2-like | |
| Similar Organisms | Cicer arietinum | |
| Alignment Scores | Identity Percentage: 92.593 Mismatches: 14 Open Gaps: 0 Evalue: 2.52E-069 | |