Marker Name: Vf_Mt4g014710_001 |
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| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_2 Location cM: 8.93 | |
| Parents SNP Call | NV643-4 call: C:C NV648-1 call: T:T | |
| Target Sequence | TGGATGGAGCATATTYCTGGTGAGAGGAAATTTTCCGAAAGAGTTTCCCATCTCTTCGTC CGAAGCTTCCAACGGTTTCGGCCAGTGGCTTTTACC[Y]GAAGATGCTGAGAGAATAACT AAATCTTGTAACTCAGTACAGCAGGCTCCACAACAAGAAAGA |
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| SNP Position | 96 | |
| NV643-3 allele (sequence) | TGGATGGAGCATATTCCTGGTGAGAGGAAATTTTCCGAAAGAGTTTCCCATCTCTTCGTC CGAAGCTTCCAACGGTTTCGGCCAGTGGCTTTTACCCGAAGATGCTGAGAGAATAACTAA ATCTTGTAACTCAGTACAGCAGGCTCCACAACAAGAAAGA |
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| NV648-1 allele (sequence) | TGGATGGAGCATATTTCTGGTGAGAGGAAATTTTCCGAAAGAGTTTCCCATCTCTTCGTC CGAAGCTTCCAACGGTTTCGGCCAGTGGCTTTTACCTGAAGATGCTGAGAGAATAACTAA ATCTTGTAACTCAGTACAGCAGGCTCCACAACAAGAAAGA |
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| EH/PIC | 0.411 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
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| Sequence Similarity | NCBI Accession Number: XM_003604531.3 NCBI Gene Symbol: LOC11428042 | |
| Gene Description | ataxin-3 homolog | |
| Similar Organisms | Medicago truncatula | |
| Alignment Scores | Identity Percentage: 88.75 Mismatches: 12 Open Gaps: 3 Evalue: 7.27E-045 | |