Marker Name: Vf_Mt4g021340_001 |
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| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_2 Location cM: 21.31 | |
| Parents SNP Call | NV643-4 call: C:C NV648-1 call: T:T | |
| Target Sequence | AGCAGGAGTCATAGTTTTATATACAAGAGACGTGGATATGTGCTTGACTCATAAGATAAT CCCTTGCCACAGGTACCAGGTTTCTGTTGCCATGGCTTT[Y]GTCACCTGGTTTCTTACC GCAATATCATCACATGTGATGTTTTGGATATTGGCCTCAGTCTAGC |
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| SNP Position | 99 | |
| NV643-3 allele (sequence) | AGCAGGAGTCATAGTTTTATATACAAGAGACGTGGATATGTGCTTGACTCATAAGATAAT CCCTTGCCACAGGTACCAGGTTTCTGTTGCCATGGCTTTCGTCACCTGGTTTCTTACCGC AATATCATCACATGTGATGTTTTGGATATTGGCCTCAGTCTAGC |
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| NV648-1 allele (sequence) | AGCAGGAGTCATAGTTTTATATACAAGAGACGTGGATATGTGCTTGACTCATAAGATAAT CCCTTGCCACAGGTACCAGGTTTCTGTTGCCATGGCTTTTGTCACCTGGTTTCTTACCGC AATATCATCACATGTGATGTTTTGGATATTGGCCTCAGTCTAGC |
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| EH/PIC | 0.369 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
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| Sequence Similarity | NCBI Accession Number: XM_003604864.3 NCBI Gene Symbol: LOC11414296 | |
| Gene Description | CASP-like protein 5B2 | |
| Similar Organisms | Medicago truncatula | |
| Alignment Scores | Identity Percentage: 92.683 Mismatches: 12 Open Gaps: 0 Evalue: 9.21E-059 | |