Marker Name: Vf_Mt4g100930_001 |
||
| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_4 Location cM: 88.23 | |
| Parents SNP Call | NV643-4 call: A:A NV648-1 call: G:A | |
| Target Sequence | GAAATCGGAGMAAGGTATCCTAARTGGTTGGAAGATCATAAAGCCAGCTTAAGCCAAGAA GAATATGACCGGTATTCACAGCAATATGGGCTGATTCGGA[R]TCTTAACGAAGTTTATG AAAAAGATTCGGGAAACTTCACCAAGATTGTYGAGCTCATGCAGAAAATGCAAGACTGTG GACAACCTCCAAAYGATATTGT |
|
| SNP Position | 100 | |
| NV643-3 allele (sequence) | GAAATCGGAGAAAGGTATCCTAAGTGGTTGGAAGATCATAAAGCCAGCTTAAGCCAAGAA GAATATGACCGGTATTCACAGCAATATGGGCTGATTCGGAATCTTAACGAAGTTTATGAA AAAGATTCGGGAAACTTCACCAAGATTGTCGAGCTCATGCAGAAAATGCAAGACTGTGGA CAACCTCCAAATGATATTGT |
|
| NV648-1 allele (sequence) | GAAATCGGAGAAAGGTATCCTAAGTGGTTGGAAGATCATAAAGCCAGCTTAAGCCAAGAA GAATATGACCGGTATTCACAGCAATATGGGCTGATTCGGAGTCTTAACGAAGTTTATGAA AAAGATTCGGGAAACTTCACCAAGATTGTTGAGCTCATGCAGAAAATGCAAGACTGTGGA CAACCTCCAAACGATATTGT |
|
| EH/PIC | 0.284 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
||
| Sequence Similarity | NCBI Accession Number: XM_014654758.2 NCBI Gene Symbol: LOC106769230 | |
| Gene Description | peroxisome biogenesis protein 19-2 | |
| Similar Organisms | Vigna radiata | |
| Alignment Scores | Identity Percentage: 84.536 Mismatches: 30 Open Gaps: 0 Evalue: 2.02E-045 | |