Marker Name: Vf_Mt4g121600_001 |
||
| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_4 Location cM: 40.94 | |
| Parents SNP Call | NV643-4 call: C:C NV648-1 call: T:T | |
| Target Sequence | AGACAAGGGGTTAGGTACATTGCCTTGGAAGGCCTGGATGTCGTCAACACTAAAACCATG CAACCTGTTCC[Y]GCAGATGGTAAAACTGTTGGTGAGATCGTGATGCGTGGAAATGCTG TGATGAAAGGGTACTTAAAGAATCCAAAAGCTAATGAAGAAAGCTTTGCAAATG |
|
| SNP Position | 71 | |
| NV643-3 allele (sequence) | AGACAAGGGGTTAGGTACATTGCCTTGGAAGGCCTGGATGTCGTCAACACTAAAACCATG CAACCTGTTCCCGCAGATGGTAAAACTGTTGGTGAGATCGTGATGCGTGGAAATGCTGTG ATGAAAGGGTACTTAAAGAATCCAAAAGCTAATGAAGAAAGCTTTGCAAATG |
|
| NV648-1 allele (sequence) | AGACAAGGGGTTAGGTACATTGCCTTGGAAGGCCTGGATGTCGTCAACACTAAAACCATG CAACCTGTTCCTGCAGATGGTAAAACTGTTGGTGAGATCGTGATGCGTGGAAATGCTGTG ATGAAAGGGTACTTAAAGAATCCAAAAGCTAATGAAGAAAGCTTTGCAAATG |
|
| EH/PIC | 0.236 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
||
| Sequence Similarity | NCBI Accession Number: XM_027500862.1 NCBI Gene Symbol: LOC113865999 | |
| Gene Description | acetate/butyrate--CoA ligase AAE7 peroxisomal-like | |
| Similar Organisms | Abrus precatorius | |
| Alignment Scores | Identity Percentage: 86.705 Mismatches: 21 Open Gaps: 2 Evalue: 7.27E-045 | |