Marker Name: Vf_Mt5g011520_001 |
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| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_1 Location cM: 80.59 | |
| Parents SNP Call | NV643-4 call: A:A NV648-1 call: A:A | |
| Target Sequence | TTGAAAGTGTCAACAACTTCGCTAGACGCCGTCAGAGAGGCGTTTGCATCATGAGCGGAA CCGGAACTGTTACAAACGTGACACTAAGGCAACCGGCTTC[R]TCTGGAGCTGTAGTCAC TCTTCACGGACGGTTCGAGATTTTGTCGCTAGCCGGATCGTTTCTTCCGCCGCCGGCTCC GCCTGCTGCTTCTGGTTTGAC |
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| SNP Position | 100 | |
| NV643-3 allele (sequence) | TTGAAAGTGTCAACAACTTCGCTAGACGCCGTCAGAGAGGCGTTTGCATCATGAGCGGAA CCGGAACTGTTACAAACGTGACACTAAGGCAACCGGCTTCGTCTGGAGCTGTAGTCACTC TTCACGGACGGTTCGAGATTTTGTCGCTAGCCGGATCGTTTCTTCCGCCGCCGGCTCCGC CTGCTGCTTCTGGTTTGAC |
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| NV648-1 allele (sequence) | TTGAAAGTGTCAACAACTTCGCTAGACGCCGTCAGAGAGGCGTTTGCATCATGAGCGGAA CCGGAACTGTTACAAACGTGACACTAAGGCAACCGGCTTCATCTGGAGCTGTAGTCACTC TTCACGGACGGTTCGAGATTTTGTCGCTAGCCGGATCGTTTCTTCCGCCGCCGGCTCCGC CTGCTGCTTCTGGTTTGAC |
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| EH/PIC | 0.47 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
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| Sequence Similarity | NCBI Accession Number: XM_003611166.3 NCBI Gene Symbol: LOC11442660 | |
| Gene Description | AT-hook motif nuclear-localized protein 26 | |
| Similar Organisms | Medicago truncatula | |
| Alignment Scores | Identity Percentage: 89.447 Mismatches: 21 Open Gaps: 0 Evalue: 3.29E-063 | |