Marker Name: Vf_Mt5g011550_001 |
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| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_1 Location cM: 78.81 | |
| Parents SNP Call | NV643-4 call: A:A NV648-1 call: A:A | |
| Target Sequence | GGTACTAATCTGGCTAACAAGTTTTTGCGAGCGAATGGAGTTACACTTTTCAAGGTGCGA GATGAAATTGTTAATGTGCTTGGAGAAGCTGATAT[R]TTTACAGTATGCCCTGAGCGTC CTCCAATGACTGAAGATGCTCAGAAGGCCCTTGATTGGGCTGTTGATAAAAANTTAAAAT C |
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| SNP Position | 95 | |
| NV643-3 allele (sequence) | GGTACTAATCTGGCTAACAAGTTTTTGCGAGCGAATGGAGTTACACTTTTCAAGGTGCGA GATGAAATTGTTAATGTGCTTGGAGAAGCTGATATGTTTACAGTATGCCCTGAGCGTCCT CCAATGACTGAAGATGCTCAGAAGGCCCTTGATTGGGCTGTTGATAAAAA-TTAAAATC |
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| NV648-1 allele (sequence) | GGTACTAATCTGGCTAACAAGTTTTTGCGAGCGAATGGAGTTACACTTTTCAAGGTGCGA GATGAAATTGTTAATGTGCTTGGAGAAGCTGATATATTTACAGTATGCCCTGAGCGTCCT CCAATGACTGAAGATGCTCAGAAGGCCCTTGATTGGGCTGTTGATAAAAAATTAAAATC |
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| EH/PIC | 0.303 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
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| Sequence Similarity | NCBI Accession Number: XM_003611169.2 NCBI Gene Symbol: LOC11439530 | |
| Gene Description | ATP-dependent Clp protease ATP-binding subunit CLPT2 | |
| Similar Organisms | Medicago truncatula | |
| Alignment Scores | Identity Percentage: 88.827 Mismatches: 19 Open Gaps: 1 Evalue: 3.33E-053 | |