Marker Name: Vf_Mt5g013980_001 |
||
| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_1 Location cM: 88.67 | |
| Parents SNP Call | NV643-4 call: C:C NV648-1 call: T:T | |
| Target Sequence | TGATCGGTTGGGCAGCCTTTGCAATGGAACTCTCTTCTTTCTTTGTGTTTGTGTTAGCCA TATTGTGTTACCTGGGGATGAGTGAGGAAGATAGTTATTA[Y]AGTATGCTATGAAACAG GAGTTCAGTAAGGCTTGATTCATTTGTGTAAAANTGTATCTGTTCCTTTTGTGTGCTGTT GATTTCTT |
|
| SNP Position | 100 | |
| NV643-3 allele (sequence) | TGATCGGTTGGGCAGCCTTTGCAATGGAACTCTCTTCTTTCTTTGTGTTTGTGTTAGCCA TATTGTGTTACCTGGGGATGAGTGAGGAAGATAGTTATTACAGTATGCTATGAAACAGGA GTTCAGTAAGGCTTGATTCATTTGTGTAAAAATGTATCTGTTCCTTTTGTGTGCTGTTGA TTTCTT |
|
| NV648-1 allele (sequence) | TGATCGGTTGGGCAGCCTTTGCAATGGAACTCTCTTCTTTCTTTGTGTTTGTGTTAGCCA TATTGTGTTACCTGGGGATGAGTGAGGAAGATAGTTATTATAGTATGCTATGAAACAGGA GTTCAGTAAGGCTTGATTCATTTGTGTAAAA-TGTATCTGTTCCTTTTGTGTGCTGTTGA TTTCTT |
|
| EH/PIC | 0.496 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
||
| Sequence Similarity | NCBI Accession Number: XM_003611386.3 NCBI Gene Symbol: LOC11436518 | |
| Gene Description | vacuolar protein sorting-associated protein 55 homolog | |
| Similar Organisms | Medicago truncatula | |
| Alignment Scores | Identity Percentage: 90.323 Mismatches: 15 Open Gaps: 1 Evalue: 7.12E-060 | |