Marker Name: Vf_Mt5g015050_001 |
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| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_1 Location cM: 91.97 | |
| Parents SNP Call | NV643-4 call: G:G NV648-1 call: G:G | |
| Target Sequence | GGAGTAGTCCGAACTTGCCGAAATTTAACGCGAGTTCGTTTGAAGGGAACAAGGATCTTT ACGGTTTTCCGTTGCCGCCGATGAGGAGTAAAGGCTTATC[S]ATTTTGGCGATTGTTGG AATCGGATTAGGAAGTGGATTAGCGAGTTTAATTTTGAGTTTTACTGGTGTTTGTATTTG GTTAAAAGTTACTGATCGGAAAG |
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| SNP Position | 100 | |
| NV643-3 allele (sequence) | GGAGTAGTCCGAACTTGCCGAAATTTAACGCGAGTTCGTTTGAAGGGAACAAGGATCTTT ACGGTTTTCCGTTGCCGCCGATGAGGAGTAAAGGCTTATCCATTTTGGCGATTGTTGGAA TCGGATTAGGAAGTGGATTAGCGAGTTTAATTTTGAGTTTTACTGGTGTTTGTATTTGGT TAAAAGTTACTGATCGGAAAG |
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| NV648-1 allele (sequence) | GGAGTAGTCCGAACTTGCCGAAATTTAACGCGAGTTCGTTTGAAGGGAACAAGGATCTTT ACGGTTTTCCGTTGCCGCCGATGAGGAGTAAAGGCTTATCGATTTTGGCGATTGTTGGAA TCGGATTAGGAAGTGGATTAGCGAGTTTAATTTTGAGTTTTACTGGTGTTTGTATTTGGT TAAAAGTTACTGATCGGAAAG |
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| EH/PIC | 0.263 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
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| Sequence Similarity | NCBI Accession Number: XM_003611490.3 NCBI Gene Symbol: LOC11430956 | |
| Gene Description | inactive LRR receptor-like serine/threonine-protein kinase BIR2 | |
| Similar Organisms | Medicago truncatula | |
| Alignment Scores | Identity Percentage: 85.572 Mismatches: 29 Open Gaps: 0 Evalue: 5.58E-051 | |