Marker Name: Vf_Mt5g015500_001 |
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Map Name | SNP-based consensus genetic map: 2016 | |
Marker Type | SNP | |
Linkage Group & Location cM | Linkage Group: group-Vf_Chr_1 Location cM: 94.53 | |
Parents SNP Call | NV643-4 call: C:C NV648-1 call: A:A | |
Target Sequence | CTGGTACTGGTAGAGGTGGTGAATCAATTTGGGGAAAACCTTTTAAGGATGAACTCAACT CCAAATTAGTCCACTCCGGAAGGGGTGTGGTTAGCATGGC[M]AACAGTGGCCCACATAC TAATGGTTCCCAGTTTTTCATCCTGTACAAGTCTGCAAATCATTTAAACTTCAAACATAC AGTTTTCGGAGG |
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SNP Position | 100 | |
NV643-3 allele (sequence) | CTGGTACTGGTAGAGGTGGTGAATCAATTTGGGGAAAACCTTTTAAGGATGAACTCAACT CCAAATTAGTCCACTCCGGAAGGGGTGTGGTTAGCATGGCCAACAGTGGCCCACATACTA ATGGTTCCCAGTTTTTCATCCTGTACAAGTCTGCAAATCATTTAAACTTCAAACATACAG TTTTCGGAGG |
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NV648-1 allele (sequence) | CTGGTACTGGTAGAGGTGGTGAATCAATTTGGGGAAAACCTTTTAAGGATGAACTCAACT CCAAATTAGTCCACTCCGGAAGGGGTGTGGTTAGCATGGCAAACAGTGGCCCACATACTA ATGGTTCCCAGTTTTTCATCCTGTACAAGTCTGCAAATCATTTAAACTTCAAACATACAG TTTTCGGAGG |
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EH/PIC | 0.266 | |
Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
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Sequence Similarity | NCBI Accession Number: XM_003611531.3 NCBI Gene Symbol: LOC11433994 | |
Gene Description | peptidyl-prolyl cis-trans isomerase CYP65 | |
Similar Organisms | Medicago truncatula | |
Alignment Scores | Identity Percentage: 95.263 Mismatches: 9 Open Gaps: 0 Evalue: 3.22E-078 |