Marker Name: Vf_Mt5g022580_001 |
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| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_1 Location cM: 110.97 | |
| Parents SNP Call | NV643-4 call: C:C NV648-1 call: T:T | |
| Target Sequence | CTCTCAGGTCACCAGTATCCGCTASTTCATCTCAACTCATGGACCCCTTTTCAGCAATAA CCCAACCCGGAATTCCCACCACTGTTAACGTTGAT[Y]TGGGTGATCGGAGCTACCCCAT TTATATCGGATCCGGTTTGCTCAATAAACCCCAACTTCTC |
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| SNP Position | 95 | |
| NV643-3 allele (sequence) | CTCTCAGGTCACCAGTATCCGCTAGTTCATCTCAACTCATGGACCCCTTTTCAGCAATAA CCCAACCCGGAATTCCCACCACTGTTAACGTTGATCTGGGTGATCGGAGCTACCCCATTT ATATCGGATCCGGTTTGCTCAATAAACCCCAACTTCTC |
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| NV648-1 allele (sequence) | CTCTCAGGTCACCAGTATCCGCTACTTCATCTCAACTCATGGACCCCTTTTCAGCAATAA CCCAACCCGGAATTCCCACCACTGTTAACGTTGATTTGGGTGATCGGAGCTACCCCATTT ATATCGGATCCGGTTTGCTCAATAAACCCCAACTTCTC |
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| EH/PIC | 0.381 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
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| Sequence Similarity | NCBI Accession Number: XM_003612164.2 NCBI Gene Symbol: LOC11420575 | |
| Gene Description | 3-dehydroquinate synthase | |
| Similar Organisms | Medicago truncatula | |
| Alignment Scores | Identity Percentage: 89.809 Mismatches: 16 Open Gaps: 0 Evalue: 3.36E-048 | |