Marker Name: Vf_Mt5g026780_001 |
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| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_1 Location cM: 118.88 | |
| Parents SNP Call | NV643-4 call: A:A NV648-1 call: A:A | |
| Target Sequence | TTCTTTCCTCTTTTGATTGGTACAGGCGCTCTTCCTGTTCAGCGCGAGTTATGGACTGAC GGTTACTTCTCTGAAATTGCTATGGTCATTGGAGGAGTGTGGTTG[M]GATGGTGGCTTC AAGCTGCAGCTGCAATGTCAAACATGGGAATGTTTGTTGCTGAAATGAGCAGTGACTCCT TCCAGCTTCTAGGAATGGCTGAGAGAGG |
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| SNP Position | 105 | |
| NV643-3 allele (sequence) | TTCTTTCCTCTTTTGATTGGTACAGGCGCTCTTCCTGTTCAGCGCGAGTTATGGACTGAC GGTTACTTCTCTGAAATTGCTATGGTCATTGGAGGAGTGTGGTTGCGATGGTGGCTTCAA GCTGCAGCTGCAATGTCAAACATGGGAATGTTTGTTGCTGAAATGAGCAGTGACTCCTTC CAGCTTCTAGGAATGGCTGAGAGAGG |
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| NV648-1 allele (sequence) | TTCTTTCCTCTTTTGATTGGTACAGGCGCTCTTCCTGTTCAGCGCGAGTTATGGACTGAC GGTTACTTCTCTGAAATTGCTATGGTCATTGGAGGAGTGTGGTTGAGATGGTGGCTTCAA GCTGCAGCTGCAATGTCAAACATGGGAATGTTTGTTGCTGAAATGAGCAGTGACTCCTTC CAGCTTCTAGGAATGGCTGAGA |
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| EH/PIC | 0.439 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
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| Sequence Similarity | NCBI Accession Number: XM_013598187.2 NCBI Gene Symbol: LOC11410981 | |
| Gene Description | probable polyamine transporter At1g31830 | |
| Similar Organisms | Medicago truncatula | |
| Alignment Scores | Identity Percentage: 92.118 Mismatches: 16 Open Gaps: 0 Evalue: 9.01E-074 | |