Marker Name: Vf_Mt5g027980_001 |
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| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_1 Location cM: 122.16 | |
| Parents SNP Call | NV643-4 call: T:T NV648-1 call: T:T | |
| Target Sequence | GGTAGCATGGATTATGCTTGCTCAATTTTCACTCAAATGGATGAACCATGTAGCTTTGAT TACAATACAATGATTAGAGGGAGTGTTAATAACATGAGAT[Y]TGAAGAAGCTTTGTCGA TGTATGTTGAAATGCTTGAAAGAGGAATTSAGSCTGATAAATTCACTTATCCTTTTGTTC TCAAGGCTTGTTCTTT |
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| SNP Position | 100 | |
| NV643-3 allele (sequence) | GGTAGCATGGATTATGCTTGCTCAATTTTCACTCAAATGGATGAACCATGTAGCTTTGAT TACAATACAATGATTAGAGGGAGTGTTAATAACATGAGATCTGAAGAAGCTTTGTCGATG TATGTTGAAATGCTTGAAAGAGGAATTGAGCCTGATAAATTCACTTATCCTTTTGTTCTC AAGGCTTGTTCTTT |
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| NV648-1 allele (sequence) | GGTAGCATGGATTATGCTTGCTCAATTTTCACTCAAATGGATGAACCATGTAGCTTTGAT TACAATACAATGATTAGAGGGAGTGTTAATAACATGAGATTTGAAGAAGCTTTGTCGATG TATGTTGAAATGCTTGAAAGAGGAATTCAGGCTGATAAATTCACTTATCCTTTTGTTCTC AAGGCTTGTTCTTT |
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| EH/PIC | 0.083 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
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| Sequence Similarity | NCBI Accession Number: XM_004512403.3 NCBI Gene Symbol: LOC101506491 | |
| Gene Description | pentatricopeptide repeat-containing protein At1g31920 | |
| Similar Organisms | Cicer arietinum | |
| Alignment Scores | Identity Percentage: 90.769 Mismatches: 16 Open Gaps: 2 Evalue: 1.96E-065 | |