Marker Name: Vf_Mt5g038280_001 |
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| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_1 Location cM: 142.01 | |
| Parents SNP Call | NV643-4 call: A:A NV648-1 call: A:A | |
| Target Sequence | ATTTTGAGAATGTTGGAAGTGGAAGCAGGGTGGTAACAGACATACCCTTCTTTCAACA[R ]CTTGAGAAAGAAGAGNAATTGTGGTGATGAAGAATATGAAGCATGTTTTCATCAACAAG GAAAGAAAAGGAGACTTTCAAGTGAACAAGTTCAGTTTCTT |
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| SNP Position | 58 | |
| NV643-3 allele (sequence) | ATTTTGAGAATGTTGGAAGTGGAAGCAGGGTGGTAACAGACATACCCTTCTTTCAACAGC TTGAGAAAGAAGAGAATTGTGGTGATGAAGAATATGAAGCATGTTTTCATCAACAAGGAA AGAAAAGGAGACTTTCAAGTGAACAAGTTCAGTTTCTT |
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| NV648-1 allele (sequence) | ATTTTGAGAATGTTGGAAGTGGAAGCAGGGTGGTAACAGACATACCCTTCTTTCAACAAC TTGAGAAAGAAGAGAATTGTGGTGATGAAGAATATGAAGCATGTTTTCATCAACAAGGAA AGAAAAGGAGACTTTCAAGTGAACAAGTTCAGTTTCTT |
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| EH/PIC | 0.124 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
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| Sequence Similarity | NCBI Accession Number: XR_003012405.1 NCBI Gene Symbol: LOC11427719 | |
| Gene Description | homeobox-leucine zipper protein HAT5 | |
| Similar Organisms | Medicago truncatula | |
| Alignment Scores | Identity Percentage: 89.873 Mismatches: 16 Open Gaps: 0 Evalue: 9.34E-049 | |