Marker Name: Vf_Mt5g073210_001 |
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Map Name | SNP-based consensus genetic map: 2016 | |
Marker Type | SNP | |
Linkage Group & Location cM | Linkage Group: group-Vf_Chr_1 Location cM: 226.19 | |
Parents SNP Call | NV643-4 call: G:G NV648-1 call: A:A | |
Target Sequence | AAGATTTGCAGCAAGCATAAACAACAACTCTTTTGTTCTTCCTAGAACAACTTCATTAAT GCAAGCTTATTATCAAGGAATTCCTGGC[R]TTTTTACCACAGATTTTCCTCCGGTTCCT CCCATACAGTTCAATTATACAGGAAATGTTCCTAGGGGTTTGTGGACTCCTAGAAAAGGA ACTAAGTTGTT |
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SNP Position | 88 | |
NV643-3 allele (sequence) | AAGATTTGCAGCAAGCATAAACAACAACTCTTTTGTTCTTCCTAGAACAACTTCATTAAT GCAAGCTTATTATCAAGGAATTCCTGGCGTTTTTACCACAGATTTTCCTCCGGTTCCTCC CATACAGTTCAATTATACAGGAAATGTTCCTAGGGGTTTGTGGACTCCTAGAAAAGGAAC TAAGTTGTT |
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NV648-1 allele (sequence) | AAGATTTGCAGCAAGCATAAACAACAACTCTTTTGTTCTTCCTAGAACAACTTCATTAAT GCAAGCTTATTATCAAGGAATTCCTGGCATTTTTACCACAGATTTTCCTCCGGTTCCTCC CATACAGTTCAATTATACAGGAAATGTTCCTAGGGGTTTGTGGACTCCTAGAAAAGGAAC TAAGTTGTT |
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EH/PIC | 0.043 | |
Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
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Sequence Similarity | NCBI Accession Number: XM_003615813.3 NCBI Gene Symbol: LOC11410085 | |
Gene Description | laccase-3 | |
Similar Organisms | Medicago truncatula | |
Alignment Scores | Identity Percentage: 91.534 Mismatches: 16 Open Gaps: 0 Evalue: 5.46E-066 |