Marker Name: Vf_Mt5g076180_001 |
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| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_1 Location cM: 219.97 | |
| Parents SNP Call | NV643-4 call: T:T NV648-1 call: C:C | |
| Target Sequence | GGCGGTATCCAAGTGAAGAAAGACAAGGTTGATGATTATGGAAGTGGAAATTCAGATATT GTTTACAGCCAAAATTTAGTTGTTCGATATATAAATACAC[Y]AACAAACAGAATTTCTG CACCAAACAGCAGCGTTCCAAATTTCAAACGATTTAGAAAG |
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| SNP Position | 100 | |
| NV643-3 allele (sequence) | GGCGGTATCCAAGTGAAGAAAGACAAGGTTGATGATTATGGAAGTGGAAATTCAGATATT GTTTACAGCCAAAATTTAGTTGTTCGATATATAAATACACTAACAAACAGAATTTCTGCA CCAAACAGCAGCGTTCCAAATTTCAAACGATTTAGAAAG |
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| NV648-1 allele (sequence) | GGCGGTATCCAAGTGAAGAAAGACAAGGTTGATGATTATGGAAGTGGAAATTCAGATATT GTTTACAGCCAAAATTTAGTTGTTCGATATATAAATACACCAACAAACAGAATTTCTGCA CCAAACAGCAGCGTTCCAAATTTCAAACGATTTAGAAAG |
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| EH/PIC | 0.198 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
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| Sequence Similarity | NCBI Accession Number: XM_003616058.2 NCBI Gene Symbol: LOC11436414 | |
| Gene Description | nijmegen breakage syndrome 1 protein | |
| Similar Organisms | Medicago truncatula | |
| Alignment Scores | Identity Percentage: 88.679 Mismatches: 18 Open Gaps: 0 Evalue: 5.62E-046 | |