Marker Name: Vf_Mt5g080450_001 |
||
| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_1 Location cM: 212.54 | |
| Parents SNP Call | NV643-4 call: C:C NV648-1 call: C:C | |
| Target Sequence | TTCGACCCAACTGCTAGAAGTGATGATGGAACATGCTTATACACATTTGAATAATCTAAG GATTCTCCTATTAGGTTAAGTTAAGGAGGAGAAGCTGAGA[M]TTTAGATAATAAATCGA ATAATTTTATCATCTTGTTAAAATATTGGATTGTTGTTGT |
|
| SNP Position | 100 | |
| NV643-3 allele (sequence) | TTCGACCCAACTGCTAGAAGTGATGATGGAACATGCTTATACACATTTGAATAATCTAAG GATTCTCCTATTAGGTTAAGTTAAGGAGGAGAAGCTGAGAATTTAGATAATAAATCGAAT AATTTTATCATCTTGTTAAAATATTGGATTGTTGTTGT |
|
| NV648-1 allele (sequence) | TTCGACCCAACTGCTAGAAGTGATGATGGAACATGCTTATACACATTTGAATAATCTAAG GATTCTCCTATTAGGTTAAGTTAAGGAGGAGAAGCTGAGACTTTAGATAATAAATCGAAT AATTTTATCATCTTGTTAAAATATTGGATTGTTGTTGT |
|
| EH/PIC | 0.325 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
||
| Sequence Similarity | NCBI Accession Number: XM_003616402.3 NCBI Gene Symbol: LOC11442149 | |
| Gene Description | ribulose bisphosphate carboxylase/oxygenase activase 2 | |
| Similar Organisms | Medicago truncatula | |
| Alignment Scores | Identity Percentage: 92.949 Mismatches: 8 Open Gaps: 3 Evalue: 7.17E-055 | |