Marker Name: Vf_Mt5g083150_001 |
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| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_1 Location cM: 205.6 | |
| Parents SNP Call | NV643-4 call: T:T NV648-1 call: T:T | |
| Target Sequence | GGTAYTCCCGACTCAATAGCTGCCTTACCCCTCTTCCGGTTGATGGTAAGGGTAAAGCGC TGAGCTGGCCCA[Y]GCCTTGGCCTCAGAGACTTACAAGTAAGCCCCCTAGCTTACGTCA CGATTCAGATGCCATTGATGAGTTCAACAAGGATAGCAAGCACTGGTCTCAACTA |
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| SNP Position | 72 | |
| NV643-3 allele (sequence) | GGTACTCCCGACTCAATAGCTGCCTTACCCCTCTTCCGGTTGATGGTAAGGGTAAAGCGC TGAGCTGGCCCACGCCTTGGCCTCAGAGACTTACAAGTAAGCCCCCTAGCTTACGTCACG ATTCAGATGCCATTGATGAGTTCAACAAGGATAGCAAGCACTGGTCTCAACTA |
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| NV648-1 allele (sequence) | GGTATTCCCGACTCAATAGCTGCCTTACCCCTCTTCCGGTTGATGGTAAGGGTAAAGCGC TGAGCTGGCCCATGCCTTGGCCTCAGAGACTTACAAGTAAGCCCCCTAGCTTACGTCACG ATTCAGATGCCATTGATGAGTTCAACAAGGATAGCAAGCACTGGTCTCAACTA |
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| EH/PIC | 0.454 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
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| Sequence Similarity | NCBI Accession Number: XM_003616635.3 NCBI Gene Symbol: LOC11424361 | |
| Gene Description | probable methyltransferase PMT23 | |
| Similar Organisms | Medicago truncatula | |
| Alignment Scores | Identity Percentage: 90.173 Mismatches: 17 Open Gaps: 0 Evalue: 1.99E-055 | |