Marker Name: Vf_Mt5g084030_001 |
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| Map Name | SNP-based consensus genetic map: 2016 | |
| Marker Type | SNP | |
| Linkage Group & Location cM | Linkage Group: group-Vf_Chr_1 Location cM: 28.03 | |
| Parents SNP Call | NV643-4 call: A:A NV648-1 call: G:G | |
| Target Sequence | AATGAAGATTCAGCTACAATAGCCACATCTGGTGAGTCTGTGGTTGAAACTCTCAAAGTT AAGGA[R]TGGGAAGTAGGAATGTTTCATAACGAGGTTGCTGCTACGCAAGGTATAAGAA TAAGGAGAAGGCCACCAACTGGACCCCCTAATCATTACGTAGGACCTT |
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| SNP Position | 65 | |
| NV643-3 allele (sequence) | AATGAAGATTCAGCTACAATAGCCACATCTGGTGAGTCTGTGGTTGAAACTCTCAAAGTT AAGGAATGGGAAGTAGGAATGTTTCATAACGAGGTTGCTGCTACGCAAGGTATAAGAATA AGGAGAAGGCCACCAACTGGACCCCCTAATCATTACGTAGGACCTT |
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| NV648-1 allele (sequence) | AATGAAGATTCAGCTACAATAGCCACATCTGGTGAGTCTGTGGTTGAAACTCTCAAAGTT AAGGAGTGGGAAGTAGGAATGTTTCATAACGAGGTTGCTGCTACGCAAGGTATAAGAATA AGGAGAAGGCCACCAACTGGACCCCCTAATCATTACGTAGGACCTT |
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| EH/PIC | 0.13 | |
| Reference | Webb et al. 2016 link | |
NCBI Alignment Result (Nucleotide BLAST) |
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| Sequence Similarity | NCBI Accession Number: XM_013598812.2 NCBI Gene Symbol: LOC11429687 | |
| Gene Description | indole-3-glycerol phosphate synthase | |
| Similar Organisms | Medicago truncatula | |
| Alignment Scores | Identity Percentage: 94.578 Mismatches: 9 Open Gaps: 0 Evalue: 7.07E-065 | |